AMARE-MED Workshop 2024

July 28–3 August 2024

sdmTMB:

https://CRAN.R-project.org/package=sdmTMB

https://github.com/pbs-assess/sdmTMB

https://pbs-assess.github.io/sdmTMB/index.html

Draft manuscript:

Preprint

Installation instructions:

https://pbs-assess.github.io/sdmTMB-teaching/amaremed-2024/00-install.html

Lectures:

1. Introduction to random fields

2. Introduction to sdmTMB and families

3. Introduction to fitting spatial models

4. Troubleshooting and diagnostics

5. Spatiotemporal models

6. Model comparison

7. Index standardization

8. Building a prediction grid

9. Combining data from multiple surveys

10. Time and spatially varying models

11. Forecasting

12. Barrier models

13. Priors

Exercises:

https://github.com/pbs-assess/sdmTMB-teaching/tree/main/amaremed-2024/exercises

Main GitHub folder:

https://github.com/pbs-assess/sdmTMB-teaching/tree/main/amaremed-2024