Articles

Getting Started

sdmTMB model description

Introduction to modelling with sdmTMB

Model Types and Families

Fitting delta (hurdle) models with sdmTMB

Poisson-link delta models

Threshold modeling with sdmTMB

Zero-one-inflated beta (ZOIB) models with sdmTMB

Fitting multispecies models with sdmTMB

Area-weighted age composition standardization with sdmTMB

Spatial Modeling of Presence-Only Data with sdmTMB

Areal models in sdmTMB: SAR, CAR, and SPDE comparison

Grid areal models in sdmTMB: CAR, SAR, and SPDE comparison

Model Estimation and Inference

Residual checking with sdmTMB

Cross-validation for model evaluation and comparison

Bayesian estimation with sdmTMB

Estimating covariate diffusion with sdmTMB

Predictions and Applications

Index standardization with sdmTMB

Forecasting with sdmTMB

Fitting spatial trend models with sdmTMB

Calculating range edges

Spatially varying coefficients with factor predictors

Visualization

Visualizing sdmTMB conditional effects using visreg

Visualizing marginal effects in sdmTMB models with ggeffects

Making pretty maps with sdmTMB output